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Claiming LTCG Tax Exemption with Home Loan

By CA Mohammed S Chokhawala

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Updated on: Apr 21st, 2025

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2 min read

Every individual dreams of owning a house someday, whether for residence or investment purposes. But with recent developments, property prices have skyrocketed, and owning a house is near impossible without external finance like bank loans. Also, with time individuals have developed an awareness about various investment avenues and have started investing in various assets such as shares, properties and so on. This has resulted in capital gains in the hands of such investors when the asset is sold and this gain is taxed. 

However, certain exemptions are available to reduce the capital gains subject to tax. This article will help you understand if a capital gains exemption can be availed if the taxpayer uses it to pay off a mortgage. 

What Is Capital Gains?

Capital gains are the profits earned when an asset such as shares, land, property etc. is sold. These profits are the excess that an individual earns i.e., the difference between the selling price and cost of acquisition. 

There are two types of capital gains:

  • Short-term Capital Gains (STCG): are gains realised on the sale of an asset held for a shorter period (less than or equal to 2 years in the case of house property). Such gains are taxed at a 20% flat rate.
  • Long-term Capital Gains (LTCG): are gains realised on the sale of an asset help for a longer period (more than 2 years in the case of house property). Such gains are taxed at a flat rate of 12.5% without indexation. However, the taxpayer has the opportunity to opt for indexation and pay tax at 20%.

As per the Finance Act, 2025 the cost of acquisition of the asset or the cost of improvement shall not include the deductions claimed under the income from house property or deductions under section 80C or 80EEA.

An exemption from capital gains tax can only be claimed when the asset is sold is a long-term asset i.e., when there are long-term capital gains. 

Eligibility For LTCG Exemption

Only long-term capital gains qualify for exemption. Various exemptions are available to the taxpayer provided that the taxpayer makes an alternative investment. 

Exemption can be claimed by

  • Using the capital gains to buy a new house property, capped at ₹10 crore
  • Investing in NHAI and REC bonds are a few ways to claim an exemption.

Can I Claim LTCG Exemption By Paying Off Home Loan?

Yes, paying off a home loan through capital gains can qualify as an exemption only if it is used to pay off a loan taken against a new house property. The requirement of Section 54 to claim an exemption is that the capital gains proceeds should be invested in a new residential property. So as long as the capital gains are used to pay off a home loan against a new house property, the taxpayer will be eligible for an exemption.

However, it is important to understand that if the capital gains are used to pay off existing or old home loans then such an exemption will not be available. 

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Frequently Asked Questions

Can I claim exemption from long term capital gain on sale of house property?

Yes, exemption under Section 54, 54F and 54EC is available for LTCG on sale of house property.

Is it mandatory to show sale of property in ITR?

Yes, if you have any gain/loss from sale of property you need to disclose the same under the head “Income from Capital Gains”.

What is the time limit for making investment in new asset under section 54?

To claim exemption under section 54, the taxpayer should purchase another house within a period of one year before or two years after the date of transfer of old house or should construct another house within a period of three years from the date of transfer.

Will I get exemption under Section 54F if I already own another house and buy one using a home loan?

No. Section 54F is allowed only if you own no more than one residential house (excluding the new one) on the date of sale. Section 54 (applicable for sale of a residential house) has no such restriction.

About the Author

I'm a chartered accountant, well-versed in the ins and outs of income tax, GST, and keeping the books balanced. Numbers are my thing, I can sift through financial statements and tax codes with the best of them. But there's another side to me – a side that thrives on words, not figures. Read more

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